Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.76■□□□□ 0.43
Col7a1Q63870 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.75■□□□□ 0.43
Col7a1Q63870 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC17.75■□□□□ 0.43
Col7a1Q63870 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col7a1Q63870 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
Col7a1Q63870 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC17.75■□□□□ 0.43
Col7a1Q63870 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col7a1Q63870 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Col7a1Q63870 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Col7a1Q63870 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.74■□□□□ 0.43
Col7a1Q63870 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col7a1Q63870 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Col7a1Q63870 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col7a1Q63870 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC17.74■□□□□ 0.43
Col7a1Q63870 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.74■□□□□ 0.43
Col7a1Q63870 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.73■□□□□ 0.43
Col7a1Q63870 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Col7a1Q63870 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.73■□□□□ 0.43
Col7a1Q63870 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.73■□□□□ 0.43
Col7a1Q63870 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Col7a1Q63870 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 AC122428.3-201ENSMUST00000215551 2290 ntBASIC17.73■□□□□ 0.43
Col7a1Q63870 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col7a1Q63870 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col7a1Q63870 Smad6-203ENSMUST00000179458 273 ntBASIC17.72■□□□□ 0.43
Col7a1Q63870 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.72■□□□□ 0.43
Col7a1Q63870 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col7a1Q63870 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col7a1Q63870 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col7a1Q63870 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.71■□□□□ 0.43
Col7a1Q63870 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Col7a1Q63870 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Col7a1Q63870 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Col7a1Q63870 Gm4968-201ENSMUST00000071458 858 ntBASIC17.71■□□□□ 0.43
Col7a1Q63870 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col7a1Q63870 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col7a1Q63870 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Col7a1Q63870 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col7a1Q63870 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC17.7■□□□□ 0.42
Col7a1Q63870 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.7■□□□□ 0.42
Col7a1Q63870 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Col7a1Q63870 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col7a1Q63870 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col7a1Q63870 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC17.69■□□□□ 0.42
Col7a1Q63870 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col7a1Q63870 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.69■□□□□ 0.42
Col7a1Q63870 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col7a1Q63870 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col7a1Q63870 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Col7a1Q63870 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.68■□□□□ 0.42
Col7a1Q63870 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.68■□□□□ 0.42
Col7a1Q63870 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.68■□□□□ 0.42
Col7a1Q63870 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col7a1Q63870 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.68■□□□□ 0.42
Col7a1Q63870 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col7a1Q63870 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col7a1Q63870 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.68■□□□□ 0.42
Col7a1Q63870 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Col7a1Q63870 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col7a1Q63870 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col7a1Q63870 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Col7a1Q63870 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col7a1Q63870 Mir6982-201ENSMUST00000184354 68 ntBASIC17.66■□□□□ 0.42
Col7a1Q63870 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Col7a1Q63870 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col7a1Q63870 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.66■□□□□ 0.42
Col7a1Q63870 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col7a1Q63870 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.65■□□□□ 0.42
Col7a1Q63870 Gm13148-201ENSMUST00000118892 745 ntBASIC17.65■□□□□ 0.42
Col7a1Q63870 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Col7a1Q63870 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Col7a1Q63870 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.64■□□□□ 0.41
Col7a1Q63870 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col7a1Q63870 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col7a1Q63870 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC17.64■□□□□ 0.41
Col7a1Q63870 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col7a1Q63870 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Col7a1Q63870 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col7a1Q63870 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.63■□□□□ 0.41
Col7a1Q63870 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col7a1Q63870 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col7a1Q63870 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col7a1Q63870 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col7a1Q63870 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC17.62■□□□□ 0.41
Col7a1Q63870 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col7a1Q63870 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col7a1Q63870 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col7a1Q63870 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col7a1Q63870 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms