Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
AtmQ62388 Gm43060-201ENSMUST00000200621 289 ntBASIC19.99■□□□□ 0.79
AtmQ62388 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.99■□□□□ 0.79
AtmQ62388 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.99■□□□□ 0.79
AtmQ62388 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AtmQ62388 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
AtmQ62388 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
AtmQ62388 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.98■□□□□ 0.79
AtmQ62388 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
AtmQ62388 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
AtmQ62388 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
AtmQ62388 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.97■□□□□ 0.79
AtmQ62388 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AtmQ62388 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AtmQ62388 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
AtmQ62388 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.96■□□□□ 0.79
AtmQ62388 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC19.96■□□□□ 0.79
AtmQ62388 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.96■□□□□ 0.79
AtmQ62388 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
AtmQ62388 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.95■□□□□ 0.78
AtmQ62388 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.95■□□□□ 0.78
AtmQ62388 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
AtmQ62388 Gm22325-201ENSMUST00000158904 308 ntBASIC19.95■□□□□ 0.78
AtmQ62388 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.95■□□□□ 0.78
AtmQ62388 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
AtmQ62388 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
AtmQ62388 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
AtmQ62388 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AtmQ62388 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AtmQ62388 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.94■□□□□ 0.78
AtmQ62388 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.94■□□□□ 0.78
AtmQ62388 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.94■□□□□ 0.78
AtmQ62388 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
AtmQ62388 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC19.94■□□□□ 0.78
AtmQ62388 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.94■□□□□ 0.78
AtmQ62388 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AtmQ62388 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
AtmQ62388 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.93■□□□□ 0.78
AtmQ62388 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.93■□□□□ 0.78
AtmQ62388 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AtmQ62388 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
AtmQ62388 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AtmQ62388 Nespas-201ENSMUST00000143738 1083 ntBASIC19.92■□□□□ 0.78
AtmQ62388 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
AtmQ62388 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
AtmQ62388 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
AtmQ62388 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.92■□□□□ 0.78
AtmQ62388 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
AtmQ62388 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
AtmQ62388 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AtmQ62388 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
AtmQ62388 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
AtmQ62388 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
AtmQ62388 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC19.91■□□□□ 0.78
AtmQ62388 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.9■□□□□ 0.78
AtmQ62388 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
AtmQ62388 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AtmQ62388 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.9■□□□□ 0.78
AtmQ62388 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
AtmQ62388 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AtmQ62388 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
AtmQ62388 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.89■□□□□ 0.78
AtmQ62388 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
AtmQ62388 Gm10602-201ENSMUST00000098239 609 ntBASIC19.89■□□□□ 0.78
AtmQ62388 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
AtmQ62388 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.89■□□□□ 0.78
AtmQ62388 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
AtmQ62388 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
AtmQ62388 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
AtmQ62388 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
AtmQ62388 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
AtmQ62388 AV356131-201ENSMUST00000206201 750 ntBASIC19.89■□□□□ 0.77
AtmQ62388 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Gm26833-201ENSMUST00000180899 440 ntBASIC19.88■□□□□ 0.77
AtmQ62388 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
AtmQ62388 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AtmQ62388 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
AtmQ62388 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.87■□□□□ 0.77
AtmQ62388 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
AtmQ62388 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
AtmQ62388 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
AtmQ62388 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
AtmQ62388 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.86■□□□□ 0.77
AtmQ62388 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.86■□□□□ 0.77
AtmQ62388 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.86■□□□□ 0.77
AtmQ62388 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms