Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six3Q62233 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six3Q62233 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six3Q62233 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six3Q62233 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Six3Q62233 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six3Q62233 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six3Q62233 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.19■□□□□ 0.82
Six3Q62233 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Six3Q62233 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.19■□□□□ 0.82
Six3Q62233 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.19■□□□□ 0.82
Six3Q62233 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.19■□□□□ 0.82
Six3Q62233 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
Six3Q62233 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six3Q62233 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Six3Q62233 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.18■□□□□ 0.82
Six3Q62233 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.18■□□□□ 0.82
Six3Q62233 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Gm45444-201ENSMUST00000211394 898 ntBASIC20.18■□□□□ 0.82
Six3Q62233 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Six3Q62233 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Six3Q62233 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Six3Q62233 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Six3Q62233 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Six3Q62233 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six3Q62233 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six3Q62233 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Six3Q62233 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Gm13238-201ENSMUST00000117655 780 ntBASIC20.16■□□□□ 0.82
Six3Q62233 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.16■□□□□ 0.82
Six3Q62233 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Six3Q62233 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Six3Q62233 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.15■□□□□ 0.82
Six3Q62233 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Six3Q62233 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Six3Q62233 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Six3Q62233 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Six3Q62233 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Six3Q62233 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Six3Q62233 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.14■□□□□ 0.81
Six3Q62233 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Six3Q62233 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Six3Q62233 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Six3Q62233 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Six3Q62233 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
Six3Q62233 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Six3Q62233 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Six3Q62233 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.12■□□□□ 0.81
Six3Q62233 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.12■□□□□ 0.81
Six3Q62233 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.12■□□□□ 0.81
Six3Q62233 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Six3Q62233 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Six3Q62233 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
Six3Q62233 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Six3Q62233 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Six3Q62233 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six3Q62233 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six3Q62233 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Six3Q62233 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms