Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc1Q61572 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.02■□□□□ -0
Foxc1Q61572 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Foxc1Q61572 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC15.02■□□□□ -0
Foxc1Q61572 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.02□□□□□ -0.01
Foxc1Q61572 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Foxc1Q61572 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC15.01□□□□□ -0.01
Foxc1Q61572 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Foxc1Q61572 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC15.01□□□□□ -0.01
Foxc1Q61572 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Gm7417-201ENSMUST00000192950 473 ntBASIC15.01□□□□□ -0.01
Foxc1Q61572 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.01□□□□□ -0.01
Foxc1Q61572 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Foxc1Q61572 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Foxc1Q61572 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Foxc1Q61572 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Foxc1Q61572 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC15□□□□□ -0.01
Foxc1Q61572 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15□□□□□ -0.01
Foxc1Q61572 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Foxc1Q61572 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Foxc1Q61572 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Gm5131-201ENSMUST00000212776 1238 ntBASIC14.99□□□□□ -0.01
Foxc1Q61572 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Foxc1Q61572 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Foxc1Q61572 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxc1Q61572 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxc1Q61572 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxc1Q61572 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxc1Q61572 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Foxc1Q61572 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Foxc1Q61572 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxc1Q61572 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC14.97□□□□□ -0.01
Foxc1Q61572 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Foxc1Q61572 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Foxc1Q61572 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC14.96□□□□□ -0.01
Foxc1Q61572 Gm40881-201ENSMUST00000223397 166 ntBASIC14.96□□□□□ -0.01
Foxc1Q61572 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Foxc1Q61572 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
Foxc1Q61572 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Foxc1Q61572 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.95□□□□□ -0.02
Foxc1Q61572 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC14.95□□□□□ -0.02
Foxc1Q61572 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms