Protein–RNA interactions for Protein: Q61500

Itm2a, Integral membrane protein 2A, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itm2aQ61500 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Itm2aQ61500 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Itm2aQ61500 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Itm2aQ61500 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Itm2aQ61500 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.33■□□□□ 0.85
Itm2aQ61500 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.33■□□□□ 0.85
Itm2aQ61500 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Itm2aQ61500 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Itm2aQ61500 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Itm2aQ61500 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Itm2aQ61500 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Itm2aQ61500 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.32■□□□□ 0.84
Itm2aQ61500 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Itm2aQ61500 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Itm2aQ61500 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Itm2aQ61500 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Itm2aQ61500 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Itm2aQ61500 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Itm2aQ61500 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itm2aQ61500 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.3■□□□□ 0.84
Itm2aQ61500 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itm2aQ61500 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itm2aQ61500 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Itm2aQ61500 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Itm2aQ61500 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.29■□□□□ 0.84
Itm2aQ61500 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itm2aQ61500 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itm2aQ61500 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Itm2aQ61500 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Itm2aQ61500 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Itm2aQ61500 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Itm2aQ61500 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itm2aQ61500 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itm2aQ61500 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.27■□□□□ 0.84
Itm2aQ61500 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Itm2aQ61500 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Itm2aQ61500 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Itm2aQ61500 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Gm27502-201ENSMUST00000183495 199 ntBASIC20.26■□□□□ 0.83
Itm2aQ61500 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Itm2aQ61500 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Itm2aQ61500 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Itm2aQ61500 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.26■□□□□ 0.83
Itm2aQ61500 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC20.25■□□□□ 0.83
Itm2aQ61500 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Itm2aQ61500 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC20.25■□□□□ 0.83
Itm2aQ61500 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Itm2aQ61500 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
Itm2aQ61500 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Itm2aQ61500 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Itm2aQ61500 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Itm2aQ61500 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms