Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.06■□□□□ 0.8
Vsx2Q61412 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.06■□□□□ 0.8
Vsx2Q61412 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vsx2Q61412 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vsx2Q61412 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC20.06■□□□□ 0.8
Vsx2Q61412 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx2Q61412 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.05■□□□□ 0.8
Vsx2Q61412 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vsx2Q61412 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx2Q61412 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Vsx2Q61412 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx2Q61412 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.05■□□□□ 0.8
Vsx2Q61412 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx2Q61412 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Vsx2Q61412 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vsx2Q61412 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Vsx2Q61412 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.04■□□□□ 0.8
Vsx2Q61412 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx2Q61412 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.04■□□□□ 0.8
Vsx2Q61412 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx2Q61412 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx2Q61412 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx2Q61412 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vsx2Q61412 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Vsx2Q61412 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.03■□□□□ 0.8
Vsx2Q61412 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.03■□□□□ 0.8
Vsx2Q61412 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.03■□□□□ 0.8
Vsx2Q61412 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC20.03■□□□□ 0.8
Vsx2Q61412 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Vsx2Q61412 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vsx2Q61412 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.02■□□□□ 0.8
Vsx2Q61412 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Vsx2Q61412 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vsx2Q61412 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vsx2Q61412 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Vsx2Q61412 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Vsx2Q61412 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx2Q61412 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx2Q61412 Gm10399-202ENSMUST00000202768 748 ntBASIC20.01■□□□□ 0.79
Vsx2Q61412 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Vsx2Q61412 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Vsx2Q61412 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Vsx2Q61412 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx2Q61412 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx2Q61412 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20■□□□□ 0.79
Vsx2Q61412 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20■□□□□ 0.79
Vsx2Q61412 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx2Q61412 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx2Q61412 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Vsx2Q61412 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx2Q61412 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.99■□□□□ 0.79
Vsx2Q61412 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx2Q61412 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx2Q61412 Gm40881-201ENSMUST00000223397 166 ntBASIC19.99■□□□□ 0.79
Vsx2Q61412 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.99■□□□□ 0.79
Vsx2Q61412 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx2Q61412 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Vsx2Q61412 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.98■□□□□ 0.79
Vsx2Q61412 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vsx2Q61412 Gm7417-201ENSMUST00000192950 473 ntBASIC19.98■□□□□ 0.79
Vsx2Q61412 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC19.98■□□□□ 0.79
Vsx2Q61412 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx2Q61412 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Vsx2Q61412 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx2Q61412 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Vsx2Q61412 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Vsx2Q61412 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx2Q61412 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx2Q61412 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx2Q61412 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
Vsx2Q61412 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.96■□□□□ 0.79
Vsx2Q61412 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Vsx2Q61412 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx2Q61412 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Vsx2Q61412 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.95■□□□□ 0.78
Vsx2Q61412 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx2Q61412 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Vsx2Q61412 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx2Q61412 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Vsx2Q61412 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.94■□□□□ 0.78
Vsx2Q61412 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.94■□□□□ 0.78
Vsx2Q61412 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Vsx2Q61412 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.93■□□□□ 0.78
Vsx2Q61412 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms