Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Hcfc1Q61191 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Hcfc1Q61191 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.68■□□□□ 0.42
Hcfc1Q61191 Spcs1-207ENSMUST00000228767 1008 ntBASIC17.68■□□□□ 0.42
Hcfc1Q61191 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Hcfc1Q61191 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Cdc34b-202ENSMUST00000188741 1252 ntBASIC17.67■□□□□ 0.42
Hcfc1Q61191 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Hcfc1Q61191 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Hcfc1Q61191 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.66■□□□□ 0.42
Hcfc1Q61191 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.66■□□□□ 0.42
Hcfc1Q61191 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.66■□□□□ 0.42
Hcfc1Q61191 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.66■□□□□ 0.42
Hcfc1Q61191 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hcfc1Q61191 Gm10849-201ENSMUST00000100397 618 ntBASIC17.65■□□□□ 0.42
Hcfc1Q61191 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Gm27405-201ENSMUST00000184201 112 ntBASIC17.65■□□□□ 0.42
Hcfc1Q61191 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hcfc1Q61191 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hcfc1Q61191 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Hcfc1Q61191 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc1Q61191 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc1Q61191 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hcfc1Q61191 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hcfc1Q61191 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Gm37179-201ENSMUST00000194862 823 ntBASIC17.63■□□□□ 0.41
Hcfc1Q61191 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hcfc1Q61191 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Gm40848-201ENSMUST00000221998 324 ntBASIC17.62■□□□□ 0.41
Hcfc1Q61191 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.62■□□□□ 0.41
Hcfc1Q61191 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.62■□□□□ 0.41
Hcfc1Q61191 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hcfc1Q61191 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hcfc1Q61191 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hcfc1Q61191 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.6■□□□□ 0.41
Hcfc1Q61191 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.6■□□□□ 0.41
Hcfc1Q61191 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.6■□□□□ 0.41
Hcfc1Q61191 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Gm43060-201ENSMUST00000200621 289 ntBASIC17.6■□□□□ 0.41
Hcfc1Q61191 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hcfc1Q61191 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hcfc1Q61191 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1Q61191 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1Q61191 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1Q61191 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1Q61191 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hcfc1Q61191 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms