Protein–RNA interactions for Protein: Q61120

Shc3, SHC-transforming protein 3, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc3Q61120 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shc3Q61120 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.29■■□□□ 1.16
Shc3Q61120 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Shc3Q61120 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
Shc3Q61120 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Shc3Q61120 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.29■■□□□ 1.16
Shc3Q61120 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Shc3Q61120 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shc3Q61120 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shc3Q61120 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shc3Q61120 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Shc3Q61120 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Shc3Q61120 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.28■■□□□ 1.16
Shc3Q61120 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Shc3Q61120 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.28■■□□□ 1.16
Shc3Q61120 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shc3Q61120 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Shc3Q61120 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shc3Q61120 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shc3Q61120 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shc3Q61120 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Shc3Q61120 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Shc3Q61120 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.27■■□□□ 1.16
Shc3Q61120 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Shc3Q61120 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
Shc3Q61120 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.25■■□□□ 1.15
Shc3Q61120 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Shc3Q61120 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Shc3Q61120 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Shc3Q61120 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
Shc3Q61120 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Shc3Q61120 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Shc3Q61120 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.23■■□□□ 1.15
Shc3Q61120 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC22.23■■□□□ 1.15
Shc3Q61120 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
Shc3Q61120 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Shc3Q61120 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Shc3Q61120 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shc3Q61120 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shc3Q61120 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.22■■□□□ 1.15
Shc3Q61120 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Shc3Q61120 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shc3Q61120 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Shc3Q61120 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Shc3Q61120 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Shc3Q61120 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Shc3Q61120 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Shc3Q61120 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shc3Q61120 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Shc3Q61120 AC122428.2-201ENSMUST00000216321 1832 ntBASIC22.2■■□□□ 1.14
Shc3Q61120 Gm16464-201ENSMUST00000117815 1095 ntBASIC22.2■■□□□ 1.14
Shc3Q61120 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Shc3Q61120 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shc3Q61120 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
Shc3Q61120 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shc3Q61120 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shc3Q61120 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shc3Q61120 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Shc3Q61120 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
Shc3Q61120 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shc3Q61120 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms