Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Sdf4Q61112 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Sdf4Q61112 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdf4Q61112 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Sdf4Q61112 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdf4Q61112 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Sdf4Q61112 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Sdf4Q61112 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Sdf4Q61112 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.95■□□□□ 0.94
Sdf4Q61112 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Sdf4Q61112 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.94■□□□□ 0.94
Sdf4Q61112 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.94■□□□□ 0.94
Sdf4Q61112 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.94■□□□□ 0.94
Sdf4Q61112 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.94■□□□□ 0.94
Sdf4Q61112 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Sdf4Q61112 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Sdf4Q61112 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdf4Q61112 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdf4Q61112 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.93■□□□□ 0.94
Sdf4Q61112 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdf4Q61112 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Sdf4Q61112 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdf4Q61112 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Sdf4Q61112 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.92■□□□□ 0.94
Sdf4Q61112 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Sdf4Q61112 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
Sdf4Q61112 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Sdf4Q61112 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Sdf4Q61112 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Sdf4Q61112 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.9■□□□□ 0.94
Sdf4Q61112 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sdf4Q61112 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.9■□□□□ 0.94
Sdf4Q61112 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sdf4Q61112 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sdf4Q61112 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Sdf4Q61112 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdf4Q61112 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.89■□□□□ 0.93
Sdf4Q61112 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.89■□□□□ 0.93
Sdf4Q61112 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdf4Q61112 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sdf4Q61112 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.88■□□□□ 0.93
Sdf4Q61112 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.88■□□□□ 0.93
Sdf4Q61112 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sdf4Q61112 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Sdf4Q61112 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sdf4Q61112 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms