Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Foxf1Q61080 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxf1Q61080 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxf1Q61080 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxf1Q61080 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.31■□□□□ 0.36
Foxf1Q61080 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Foxf1Q61080 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Foxf1Q61080 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxf1Q61080 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxf1Q61080 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxf1Q61080 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Foxf1Q61080 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.3■□□□□ 0.36
Foxf1Q61080 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxf1Q61080 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxf1Q61080 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxf1Q61080 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxf1Q61080 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxf1Q61080 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxf1Q61080 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxf1Q61080 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Foxf1Q61080 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Foxf1Q61080 Gm10232-201ENSMUST00000089221 720 ntBASIC17.29■□□□□ 0.36
Foxf1Q61080 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.29■□□□□ 0.36
Foxf1Q61080 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxf1Q61080 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxf1Q61080 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxf1Q61080 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.28■□□□□ 0.36
Foxf1Q61080 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.28■□□□□ 0.36
Foxf1Q61080 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxf1Q61080 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
Foxf1Q61080 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Foxf1Q61080 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Foxf1Q61080 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.27■□□□□ 0.36
Foxf1Q61080 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC17.27■□□□□ 0.36
Foxf1Q61080 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.27■□□□□ 0.35
Foxf1Q61080 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Foxf1Q61080 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.26■□□□□ 0.35
Foxf1Q61080 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Foxf1Q61080 Golph3-202ENSMUST00000226517 2359 ntBASIC17.26■□□□□ 0.35
Foxf1Q61080 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Foxf1Q61080 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.25■□□□□ 0.35
Foxf1Q61080 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Foxf1Q61080 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Foxf1Q61080 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Foxf1Q61080 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Foxf1Q61080 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Foxf1Q61080 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Foxf1Q61080 Gm5812-201ENSMUST00000061073 957 ntBASIC17.24■□□□□ 0.35
Foxf1Q61080 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Foxf1Q61080 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Foxf1Q61080 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.23■□□□□ 0.35
Foxf1Q61080 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Foxf1Q61080 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.22■□□□□ 0.35
Foxf1Q61080 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.22■□□□□ 0.35
Foxf1Q61080 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Foxf1Q61080 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Foxf1Q61080 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.21■□□□□ 0.35
Foxf1Q61080 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Foxf1Q61080 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 389.8 ms