Protein–RNA interactions for Protein: Q5U430

Ubr3, E3 ubiquitin-protein ligase UBR3, mousemouse

Predictions only

Length 1,889 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3Q5U430 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Ubr3Q5U430 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
Ubr3Q5U430 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Ubr3Q5U430 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC25.84■■□□□ 1.73
Ubr3Q5U430 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
Ubr3Q5U430 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC25.84■■□□□ 1.73
Ubr3Q5U430 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Ubr3Q5U430 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Ubr3Q5U430 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.83■■□□□ 1.72
Ubr3Q5U430 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ubr3Q5U430 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Ubr3Q5U430 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
Ubr3Q5U430 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Ubr3Q5U430 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr3Q5U430 Gm42642-201ENSMUST00000200683 355 ntBASIC25.81■■□□□ 1.72
Ubr3Q5U430 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ubr3Q5U430 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ubr3Q5U430 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC25.8■■□□□ 1.72
Ubr3Q5U430 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr3Q5U430 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.79■■□□□ 1.72
Ubr3Q5U430 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr3Q5U430 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ubr3Q5U430 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ubr3Q5U430 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr3Q5U430 Smad6-203ENSMUST00000179458 273 ntBASIC25.77■■□□□ 1.72
Ubr3Q5U430 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr3Q5U430 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Ubr3Q5U430 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ubr3Q5U430 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
Ubr3Q5U430 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC25.77■■□□□ 1.72
Ubr3Q5U430 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ubr3Q5U430 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Ubr3Q5U430 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC25.75■■□□□ 1.71
Ubr3Q5U430 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Ubr3Q5U430 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Ubr3Q5U430 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC25.74■■□□□ 1.71
Ubr3Q5U430 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ubr3Q5U430 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ubr3Q5U430 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.74■■□□□ 1.71
Ubr3Q5U430 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.74■■□□□ 1.71
Ubr3Q5U430 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
Ubr3Q5U430 AC166356.1-201ENSMUST00000228236 1426 ntBASIC25.74■■□□□ 1.71
Ubr3Q5U430 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ubr3Q5U430 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr3Q5U430 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.73■■□□□ 1.71
Ubr3Q5U430 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr3Q5U430 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr3Q5U430 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr3Q5U430 AC165080.2-201ENSMUST00000217491 1530 ntBASIC25.73■■□□□ 1.71
Ubr3Q5U430 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Ubr3Q5U430 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.72■■□□□ 1.71
Ubr3Q5U430 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
Ubr3Q5U430 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr3Q5U430 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
Ubr3Q5U430 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr3Q5U430 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Ubr3Q5U430 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Ubr3Q5U430 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC25.7■■□□□ 1.71
Ubr3Q5U430 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Ubr3Q5U430 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr3Q5U430 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr3Q5U430 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Ubr3Q5U430 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.69■■□□□ 1.7
Ubr3Q5U430 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC25.69■■□□□ 1.7
Ubr3Q5U430 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ubr3Q5U430 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
Ubr3Q5U430 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC25.69■■□□□ 1.7
Ubr3Q5U430 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr3Q5U430 Gm12669-201ENSMUST00000122162 1009 ntBASIC25.68■■□□□ 1.7
Ubr3Q5U430 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr3Q5U430 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr3Q5U430 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Ubr3Q5U430 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Ubr3Q5U430 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Ubr3Q5U430 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC25.67■■□□□ 1.7
Ubr3Q5U430 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC25.67■■□□□ 1.7
Ubr3Q5U430 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.67■■□□□ 1.7
Ubr3Q5U430 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms