Protein–RNA interactions for Protein: Q5S006

Lrrk2, Leucine-rich repeat serine/threonine-protein kinase 2, mousemouse

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrk2Q5S006 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.45■□□□□ 0.54
Lrrk2Q5S006 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrk2Q5S006 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lrrk2Q5S006 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC18.45■□□□□ 0.54
Lrrk2Q5S006 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lrrk2Q5S006 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lrrk2Q5S006 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Lrrk2Q5S006 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrk2Q5S006 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrk2Q5S006 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC18.43■□□□□ 0.54
Lrrk2Q5S006 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.43■□□□□ 0.54
Lrrk2Q5S006 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrk2Q5S006 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Lrrk2Q5S006 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lrrk2Q5S006 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Gm22240-201ENSMUST00000175225 82 ntBASIC18.41■□□□□ 0.54
Lrrk2Q5S006 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Lrrk2Q5S006 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Lrrk2Q5S006 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.4■□□□□ 0.54
Lrrk2Q5S006 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.4■□□□□ 0.54
Lrrk2Q5S006 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Lrrk2Q5S006 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Gm10252-201ENSMUST00000209541 832 ntBASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Lrrk2Q5S006 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Gm10653-202ENSMUST00000139570 835 ntBASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Lrrk2Q5S006 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 AC135963.1-201ENSMUST00000211640 717 ntBASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Lrrk2Q5S006 Gm42778-201ENSMUST00000199644 553 ntBASIC18.35■□□□□ 0.53
Lrrk2Q5S006 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.35■□□□□ 0.53
Lrrk2Q5S006 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.35■□□□□ 0.53
Lrrk2Q5S006 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrk2Q5S006 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Lrrk2Q5S006 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Lrrk2Q5S006 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Lrrk2Q5S006 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Lrrk2Q5S006 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Lrrk2Q5S006 AC165080.2-201ENSMUST00000217491 1530 ntBASIC18.33■□□□□ 0.52
Lrrk2Q5S006 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.33■□□□□ 0.52
Lrrk2Q5S006 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Lrrk2Q5S006 Gm7143-201ENSMUST00000222811 859 ntBASIC18.32■□□□□ 0.52
Lrrk2Q5S006 Gm6934-201ENSMUST00000194780 1905 ntBASIC18.32■□□□□ 0.52
Lrrk2Q5S006 Gm43530-201ENSMUST00000195920 274 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 82.8 ms