Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav7d-4Q5R1H9 Gm5112-201ENSMUST00000204407 2368 ntBASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav7d-4Q5R1H9 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav7d-4Q5R1H9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav7d-4Q5R1H9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav7d-4Q5R1H9 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav7d-4Q5R1H9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Trav7d-4Q5R1H9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Trav7d-4Q5R1H9 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trav7d-4Q5R1H9 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms