Protein–RNA interactions for Protein: Q5R1B6

Trav8d-2, T cell receptor alpha variable 8D-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-2Q5R1B6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 AC112142.1-201ENSMUST00000228796 918 ntBASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Trav8d-2Q5R1B6 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Trav8d-2Q5R1B6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Gm10849-201ENSMUST00000100397 618 ntBASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Gm43530-201ENSMUST00000195920 274 ntBASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Trav8d-2Q5R1B6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Trav8d-2Q5R1B6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.39■□□□□ 0.85
Trav8d-2Q5R1B6 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Trav8d-2Q5R1B6 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav8d-2Q5R1B6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Trav8d-2Q5R1B6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Trav8d-2Q5R1B6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 Gm37179-201ENSMUST00000194862 823 ntBASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Trav8d-2Q5R1B6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Trav8d-2Q5R1B6 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Trav8d-2Q5R1B6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav8d-2Q5R1B6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.35■□□□□ 0.85
Trav8d-2Q5R1B6 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav8d-2Q5R1B6 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.35■□□□□ 0.85
Trav8d-2Q5R1B6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trav8d-2Q5R1B6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trav8d-2Q5R1B6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav8d-2Q5R1B6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.33■□□□□ 0.85
Trav8d-2Q5R1B6 Gm18671-201ENSMUST00000214826 683 ntBASIC20.33■□□□□ 0.85
Trav8d-2Q5R1B6 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trav8d-2Q5R1B6 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Trav8d-2Q5R1B6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Trav8d-2Q5R1B6 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trav8d-2Q5R1B6 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav8d-2Q5R1B6 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav8d-2Q5R1B6 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trav8d-2Q5R1B6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Trav8d-2Q5R1B6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav8d-2Q5R1B6 Smad6-203ENSMUST00000179458 273 ntBASIC20.29■□□□□ 0.84
Trav8d-2Q5R1B6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav8d-2Q5R1B6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trav8d-2Q5R1B6 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav8d-2Q5R1B6 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.28■□□□□ 0.84
Trav8d-2Q5R1B6 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trav8d-2Q5R1B6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 123.5 ms