Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Rnf20Q5DTM8 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC24.62■■□□□ 1.53
Rnf20Q5DTM8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC24.62■■□□□ 1.53
Rnf20Q5DTM8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rnf20Q5DTM8 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
Rnf20Q5DTM8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Rnf20Q5DTM8 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Gm38160-201ENSMUST00000193090 2499 ntBASIC24.6■■□□□ 1.53
Rnf20Q5DTM8 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Gm43006-201ENSMUST00000197702 1602 ntBASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
Rnf20Q5DTM8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Rnf20Q5DTM8 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
Rnf20Q5DTM8 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Rnf20Q5DTM8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf20Q5DTM8 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf20Q5DTM8 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC24.56■■□□□ 1.52
Rnf20Q5DTM8 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC24.56■■□□□ 1.52
Rnf20Q5DTM8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Rnf20Q5DTM8 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC24.54■■□□□ 1.52
Rnf20Q5DTM8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC24.53■■□□□ 1.52
Rnf20Q5DTM8 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Rnf20Q5DTM8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Rnf20Q5DTM8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Gm5812-201ENSMUST00000061073 957 ntBASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Gm4430-201ENSMUST00000192413 1943 ntBASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.5■■□□□ 1.51
Rnf20Q5DTM8 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Retrieved 100 of 76,532 protein–RNA pairs in 56.7 ms