Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Scn2bQ56A07 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Scn2bQ56A07 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Scn2bQ56A07 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Scn2bQ56A07 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Scn2bQ56A07 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Scn2bQ56A07 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Scn2bQ56A07 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Scn2bQ56A07 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.39■□□□□ 0.86
Scn2bQ56A07 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Scn2bQ56A07 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn2bQ56A07 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn2bQ56A07 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.38■□□□□ 0.85
Scn2bQ56A07 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Scn2bQ56A07 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Scn2bQ56A07 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.37■□□□□ 0.85
Scn2bQ56A07 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.37■□□□□ 0.85
Scn2bQ56A07 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Scn2bQ56A07 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Gm45444-201ENSMUST00000211394 898 ntBASIC20.36■□□□□ 0.85
Scn2bQ56A07 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Scn2bQ56A07 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Scn2bQ56A07 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.34■□□□□ 0.85
Scn2bQ56A07 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Scn2bQ56A07 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn2bQ56A07 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Scn2bQ56A07 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
Scn2bQ56A07 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn2bQ56A07 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Scn2bQ56A07 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.33■□□□□ 0.84
Scn2bQ56A07 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Scn2bQ56A07 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Scn2bQ56A07 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms