Protein–RNA interactions for Protein: Q3UHK8

Tnrc6a, Trinucleotide repeat-containing gene 6A protein, mousemouse

Known RBP Predictions only

Length 1,896 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc6aQ3UHK8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc6aQ3UHK8 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.39■□□□□ 0.69
Tnrc6aQ3UHK8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc6aQ3UHK8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc6aQ3UHK8 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Tnrc6aQ3UHK8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Tnrc6aQ3UHK8 Gm43173-201ENSMUST00000202246 593 ntBASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.37■□□□□ 0.69
Tnrc6aQ3UHK8 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Tnrc6aQ3UHK8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Tnrc6aQ3UHK8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnrc6aQ3UHK8 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnrc6aQ3UHK8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.34■□□□□ 0.69
Tnrc6aQ3UHK8 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Tnrc6aQ3UHK8 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Tnrc6aQ3UHK8 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnrc6aQ3UHK8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Tnrc6aQ3UHK8 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnrc6aQ3UHK8 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Tnrc6aQ3UHK8 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Tnrc6aQ3UHK8 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Gm8495-201ENSMUST00000188740 694 ntBASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Tnrc6aQ3UHK8 Flvcr1-202ENSMUST00000191946 1216 ntBASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Tnrc6aQ3UHK8 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Dmtn-209ENSMUST00000228295 2572 ntBASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Tnrc6aQ3UHK8 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Gm21168-201ENSMUST00000199646 1096 ntBASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC19.29■□□□□ 0.68
Tnrc6aQ3UHK8 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms