Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC17.95■□□□□ 0.46
Q3U1D9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC17.95■□□□□ 0.46
Q3U1D9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Q3U1D9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Q3U1D9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.94■□□□□ 0.46
Q3U1D9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
Q3U1D9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Q3U1D9 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC17.93■□□□□ 0.46
Q3U1D9 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.93■□□□□ 0.46
Q3U1D9 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Q3U1D9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Q3U1D9 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q3U1D9 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.92■□□□□ 0.46
Q3U1D9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC17.92■□□□□ 0.46
Q3U1D9 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Q3U1D9 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Q3U1D9 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q3U1D9 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.92■□□□□ 0.46
Q3U1D9 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q3U1D9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Q3U1D9 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Q3U1D9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Gm45417-201ENSMUST00000209533 758 ntBASIC17.91■□□□□ 0.46
Q3U1D9 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.91■□□□□ 0.46
Q3U1D9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Q3U1D9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Q3U1D9 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.9■□□□□ 0.46
Q3U1D9 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.9■□□□□ 0.46
Q3U1D9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Q3U1D9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Q3U1D9 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.89■□□□□ 0.45
Q3U1D9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Q3U1D9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Q3U1D9 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.88■□□□□ 0.45
Q3U1D9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC17.88■□□□□ 0.45
Q3U1D9 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.88■□□□□ 0.45
Q3U1D9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC17.88■□□□□ 0.45
Q3U1D9 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Q3U1D9 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q3U1D9 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Q3U1D9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Q3U1D9 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.87■□□□□ 0.45
Q3U1D9 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.87■□□□□ 0.45
Q3U1D9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.87■□□□□ 0.45
Q3U1D9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Q3U1D9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Q3U1D9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms