Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdkl4Q3TZA2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdkl4Q3TZA2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdkl4Q3TZA2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdkl4Q3TZA2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Cdkl4Q3TZA2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdkl4Q3TZA2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Gm13241-201ENSMUST00000094493 780 ntBASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdkl4Q3TZA2 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Gm9847-201ENSMUST00000052528 599 ntBASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdkl4Q3TZA2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cdkl4Q3TZA2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cdkl4Q3TZA2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms