Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Trim72Q1XH17 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim72Q1XH17 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim72Q1XH17 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Trim72Q1XH17 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Trim72Q1XH17 Gm5131-201ENSMUST00000212776 1238 ntBASIC22.09■■□□□ 1.13
Trim72Q1XH17 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim72Q1XH17 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Trim72Q1XH17 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Trim72Q1XH17 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC22.08■■□□□ 1.13
Trim72Q1XH17 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Trim72Q1XH17 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.12
Trim72Q1XH17 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.12
Trim72Q1XH17 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.07■■□□□ 1.12
Trim72Q1XH17 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Trim72Q1XH17 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.06■■□□□ 1.12
Trim72Q1XH17 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim72Q1XH17 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Trim72Q1XH17 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Trim72Q1XH17 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
Trim72Q1XH17 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim72Q1XH17 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim72Q1XH17 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim72Q1XH17 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim72Q1XH17 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Trim72Q1XH17 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Trim72Q1XH17 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Trim72Q1XH17 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Trim72Q1XH17 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.02■■□□□ 1.11
Trim72Q1XH17 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Trim72Q1XH17 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Gm20634-201ENSMUST00000090779 2956 ntBASIC22.01■■□□□ 1.11
Trim72Q1XH17 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Trim72Q1XH17 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim72Q1XH17 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim72Q1XH17 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Trim72Q1XH17 Gm43006-201ENSMUST00000197702 1602 ntBASIC22■■□□□ 1.11
Trim72Q1XH17 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC22■■□□□ 1.11
Trim72Q1XH17 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC22■■□□□ 1.11
Trim72Q1XH17 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Trim72Q1XH17 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.99■■□□□ 1.11
Trim72Q1XH17 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.99■■□□□ 1.11
Trim72Q1XH17 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Trim72Q1XH17 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim72Q1XH17 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim72Q1XH17 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Trim72Q1XH17 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Trim72Q1XH17 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim72Q1XH17 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim72Q1XH17 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim72Q1XH17 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Trim72Q1XH17 Gm7417-201ENSMUST00000192950 473 ntBASIC21.96■■□□□ 1.11
Trim72Q1XH17 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms