Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Ptchd3Q0EEE2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ptchd3Q0EEE2 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Gm10420-201ENSMUST00000121713 882 ntBASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Ptchd3Q0EEE2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd3Q0EEE2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.83■□□□□ 0.76
Ptchd3Q0EEE2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Ptchd3Q0EEE2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Ptchd3Q0EEE2 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Ptchd3Q0EEE2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ptchd3Q0EEE2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Ptchd3Q0EEE2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ptchd3Q0EEE2 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ptchd3Q0EEE2 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ptchd3Q0EEE2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ptchd3Q0EEE2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms