Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Chd8Q09XV5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd8Q09XV5 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd8Q09XV5 Mir5133-201ENSMUST00000174955 77 ntBASIC19.08■□□□□ 0.65
Chd8Q09XV5 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd8Q09XV5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Chd8Q09XV5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd8Q09XV5 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
Chd8Q09XV5 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd8Q09XV5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Chd8Q09XV5 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Chd8Q09XV5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.07■□□□□ 0.64
Chd8Q09XV5 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Chd8Q09XV5 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
Chd8Q09XV5 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
Chd8Q09XV5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.06■□□□□ 0.64
Chd8Q09XV5 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
Chd8Q09XV5 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Chd8Q09XV5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Chd8Q09XV5 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Chd8Q09XV5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC19.04■□□□□ 0.64
Chd8Q09XV5 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Chd8Q09XV5 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd8Q09XV5 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Chd8Q09XV5 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Chd8Q09XV5 Gm27741-201ENSMUST00000185060 237 ntBASIC19.04■□□□□ 0.64
Chd8Q09XV5 Gm715-201ENSMUST00000117865 831 ntBASIC19.03■□□□□ 0.64
Chd8Q09XV5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Gm25925-201ENSMUST00000158314 306 ntBASIC19.03■□□□□ 0.64
Chd8Q09XV5 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Chd8Q09XV5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.02■□□□□ 0.64
Chd8Q09XV5 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.02■□□□□ 0.64
Chd8Q09XV5 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Chd8Q09XV5 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Chd8Q09XV5 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Chd8Q09XV5 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.01■□□□□ 0.63
Chd8Q09XV5 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd8Q09XV5 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Chd8Q09XV5 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19■□□□□ 0.63
Chd8Q09XV5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Chd8Q09XV5 Gm13148-201ENSMUST00000118892 745 ntBASIC19■□□□□ 0.63
Chd8Q09XV5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.99■□□□□ 0.63
Chd8Q09XV5 Gm11643-201ENSMUST00000119578 864 ntBASIC18.99■□□□□ 0.63
Chd8Q09XV5 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd8Q09XV5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd8Q09XV5 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.99■□□□□ 0.63
Chd8Q09XV5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chd8Q09XV5 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chd8Q09XV5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
Chd8Q09XV5 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd8Q09XV5 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chd8Q09XV5 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Chd8Q09XV5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd8Q09XV5 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chd8Q09XV5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd8Q09XV5 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chd8Q09XV5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms