Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.78■□□□□ 0.6
Scn1bP97952 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.78■□□□□ 0.6
Scn1bP97952 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Scn1bP97952 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.78■□□□□ 0.6
Scn1bP97952 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Scn1bP97952 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn1bP97952 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn1bP97952 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1bP97952 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn1bP97952 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC18.77■□□□□ 0.6
Scn1bP97952 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1bP97952 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Scn1bP97952 AC122317.2-201ENSMUST00000218708 1248 ntBASIC18.77■□□□□ 0.6
Scn1bP97952 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.77■□□□□ 0.6
Scn1bP97952 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Scn1bP97952 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Scn1bP97952 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
Scn1bP97952 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Scn1bP97952 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.75■□□□□ 0.59
Scn1bP97952 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Scn1bP97952 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Scn1bP97952 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC18.74■□□□□ 0.59
Scn1bP97952 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Scn1bP97952 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 AC153911.1-201ENSMUST00000220378 758 ntBASIC18.74■□□□□ 0.59
Scn1bP97952 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.74■□□□□ 0.59
Scn1bP97952 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Scn1bP97952 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Scn1bP97952 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Scn1bP97952 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Scn1bP97952 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.73■□□□□ 0.59
Scn1bP97952 Terc-201ENSMUST00000082862 423 ntBASIC18.73■□□□□ 0.59
Scn1bP97952 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Scn1bP97952 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scn1bP97952 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC18.72■□□□□ 0.59
Scn1bP97952 Pkd1-207ENSMUST00000228550 1050 ntBASIC18.72■□□□□ 0.59
Scn1bP97952 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Scn1bP97952 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC18.72■□□□□ 0.59
Scn1bP97952 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Scn1bP97952 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Scn1bP97952 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1bP97952 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.71■□□□□ 0.59
Scn1bP97952 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1bP97952 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Scn1bP97952 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Scn1bP97952 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1bP97952 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1bP97952 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Scn1bP97952 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Scn1bP97952 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.7■□□□□ 0.58
Scn1bP97952 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Scn1bP97952 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Scn1bP97952 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.69■□□□□ 0.58
Scn1bP97952 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms