Protein–RNA interactions for Protein: P70662

Ldb1, LIM domain-binding protein 1, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1P70662 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb1P70662 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb1P70662 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Ldb1P70662 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb1P70662 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.58■□□□□ 0.89
Ldb1P70662 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.58■□□□□ 0.89
Ldb1P70662 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb1P70662 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Ldb1P70662 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ldb1P70662 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Ldb1P70662 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb1P70662 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb1P70662 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb1P70662 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Ldb1P70662 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ldb1P70662 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.56■□□□□ 0.88
Ldb1P70662 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.56■□□□□ 0.88
Ldb1P70662 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ldb1P70662 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.56■□□□□ 0.88
Ldb1P70662 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb1P70662 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.55■□□□□ 0.88
Ldb1P70662 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ldb1P70662 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.55■□□□□ 0.88
Ldb1P70662 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Ldb1P70662 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb1P70662 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb1P70662 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.54■□□□□ 0.88
Ldb1P70662 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Ldb1P70662 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Ldb1P70662 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb1P70662 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb1P70662 Gm15820-201ENSMUST00000201566 728 ntBASIC20.53■□□□□ 0.88
Ldb1P70662 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.53■□□□□ 0.88
Ldb1P70662 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb1P70662 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Ldb1P70662 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb1P70662 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb1P70662 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb1P70662 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb1P70662 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.51■□□□□ 0.87
Ldb1P70662 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb1P70662 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.5■□□□□ 0.87
Ldb1P70662 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ldb1P70662 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb1P70662 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb1P70662 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.49■□□□□ 0.87
Ldb1P70662 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.49■□□□□ 0.87
Ldb1P70662 Gm5812-201ENSMUST00000061073 957 ntBASIC20.49■□□□□ 0.87
Ldb1P70662 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb1P70662 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb1P70662 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb1P70662 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb1P70662 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ldb1P70662 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ldb1P70662 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ldb1P70662 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.48■□□□□ 0.87
Ldb1P70662 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.48■□□□□ 0.87
Ldb1P70662 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Ldb1P70662 Gm10399-202ENSMUST00000202768 748 ntBASIC20.48■□□□□ 0.87
Ldb1P70662 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Ldb1P70662 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.48■□□□□ 0.87
Ldb1P70662 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ldb1P70662 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ldb1P70662 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.48■□□□□ 0.87
Ldb1P70662 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ldb1P70662 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ldb1P70662 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.47■□□□□ 0.87
Ldb1P70662 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.47■□□□□ 0.87
Ldb1P70662 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.47■□□□□ 0.87
Ldb1P70662 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Ldb1P70662 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ldb1P70662 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms