Protein–RNA interactions for Protein: P62313

Lsm6, U6 snRNA-associated Sm-like protein LSm6, mousemouse

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm6P62313 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Lsm6P62313 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.12■□□□□ 0.49
Lsm6P62313 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Lsm6P62313 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.12■□□□□ 0.49
Lsm6P62313 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Lsm6P62313 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Lsm6P62313 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Lsm6P62313 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
Lsm6P62313 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Lsm6P62313 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.11■□□□□ 0.49
Lsm6P62313 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.11■□□□□ 0.49
Lsm6P62313 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Lsm6P62313 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Lsm6P62313 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm6P62313 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.1■□□□□ 0.49
Lsm6P62313 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm6P62313 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm6P62313 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Lsm6P62313 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm6P62313 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm6P62313 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm6P62313 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm6P62313 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Lsm6P62313 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.09■□□□□ 0.49
Lsm6P62313 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm6P62313 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm6P62313 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Lsm6P62313 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC18.08■□□□□ 0.48
Lsm6P62313 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Lsm6P62313 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.07■□□□□ 0.48
Lsm6P62313 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.07■□□□□ 0.48
Lsm6P62313 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.07■□□□□ 0.48
Lsm6P62313 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.07■□□□□ 0.48
Lsm6P62313 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Lsm6P62313 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Lsm6P62313 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Lsm6P62313 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Lsm6P62313 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.05■□□□□ 0.48
Lsm6P62313 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.05■□□□□ 0.48
Lsm6P62313 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
Lsm6P62313 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Lsm6P62313 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm6P62313 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm6P62313 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.04■□□□□ 0.48
Lsm6P62313 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm6P62313 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.04■□□□□ 0.48
Lsm6P62313 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.04■□□□□ 0.48
Lsm6P62313 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Lsm6P62313 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Lsm6P62313 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm6P62313 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Lsm6P62313 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Lsm6P62313 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Lsm6P62313 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm6P62313 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.03■□□□□ 0.48
Lsm6P62313 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.03■□□□□ 0.48
Lsm6P62313 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.03■□□□□ 0.48
Lsm6P62313 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm6P62313 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm6P62313 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm6P62313 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Lsm6P62313 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms