Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Sec61a1P61620 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a1P61620 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.04■□□□□ 0.48
Sec61a1P61620 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC18.04■□□□□ 0.48
Sec61a1P61620 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.04■□□□□ 0.48
Sec61a1P61620 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Sec61a1P61620 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Sec61a1P61620 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Sec61a1P61620 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
Sec61a1P61620 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
Sec61a1P61620 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sec61a1P61620 Gm45444-201ENSMUST00000211394 898 ntBASIC18.03■□□□□ 0.48
Sec61a1P61620 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Sec61a1P61620 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Sec61a1P61620 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sec61a1P61620 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Sec61a1P61620 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC18.02■□□□□ 0.47
Sec61a1P61620 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Sec61a1P61620 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.01■□□□□ 0.47
Sec61a1P61620 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Sec61a1P61620 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sec61a1P61620 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Sec61a1P61620 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.01■□□□□ 0.47
Sec61a1P61620 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Sec61a1P61620 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sec61a1P61620 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Sec61a1P61620 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Gm43566-201ENSMUST00000196851 808 ntBASIC18■□□□□ 0.47
Sec61a1P61620 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Sec61a1P61620 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Sec61a1P61620 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Sec61a1P61620 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.99■□□□□ 0.47
Sec61a1P61620 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.99■□□□□ 0.47
Sec61a1P61620 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Sec61a1P61620 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sec61a1P61620 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Sec61a1P61620 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Sec61a1P61620 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.98■□□□□ 0.47
Sec61a1P61620 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.98■□□□□ 0.47
Sec61a1P61620 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.98■□□□□ 0.47
Sec61a1P61620 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Sec61a1P61620 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Sec61a1P61620 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a1P61620 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.97■□□□□ 0.47
Sec61a1P61620 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a1P61620 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a1P61620 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Sec61a1P61620 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a1P61620 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a1P61620 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a1P61620 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.96■□□□□ 0.47
Sec61a1P61620 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.96■□□□□ 0.47
Sec61a1P61620 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Sec61a1P61620 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a1P61620 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Sec61a1P61620 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Sec61a1P61620 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Sec61a1P61620 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sec61a1P61620 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Sec61a1P61620 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Sec61a1P61620 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Gm15546-201ENSMUST00000122095 826 ntBASIC17.95■□□□□ 0.46
Sec61a1P61620 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Sec61a1P61620 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Sec61a1P61620 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms