Protein–RNA interactions for Protein: P59108

Cpne2, Copine-2, mousemouse

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne2P59108 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne2P59108 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cpne2P59108 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cpne2P59108 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Cpne2P59108 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne2P59108 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne2P59108 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Cpne2P59108 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cpne2P59108 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cpne2P59108 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
Cpne2P59108 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpne2P59108 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cpne2P59108 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.24■□□□□ 0.35
Cpne2P59108 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Cpne2P59108 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cpne2P59108 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Cpne2P59108 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Cpne2P59108 Gm5987-201ENSMUST00000196433 1151 ntBASIC17.23■□□□□ 0.35
Cpne2P59108 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.23■□□□□ 0.35
Cpne2P59108 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cpne2P59108 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Cpne2P59108 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.22■□□□□ 0.35
Cpne2P59108 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cpne2P59108 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Cpne2P59108 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cpne2P59108 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.22■□□□□ 0.35
Cpne2P59108 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.22■□□□□ 0.35
Cpne2P59108 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Cpne2P59108 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cpne2P59108 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne2P59108 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.21■□□□□ 0.35
Cpne2P59108 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cpne2P59108 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne2P59108 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Cpne2P59108 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne2P59108 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne2P59108 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cpne2P59108 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Cpne2P59108 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Cpne2P59108 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.2■□□□□ 0.34
Cpne2P59108 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC17.2■□□□□ 0.34
Cpne2P59108 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cpne2P59108 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cpne2P59108 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cpne2P59108 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Cpne2P59108 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cpne2P59108 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC17.19■□□□□ 0.34
Cpne2P59108 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
Cpne2P59108 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpne2P59108 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cpne2P59108 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cpne2P59108 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne2P59108 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Cpne2P59108 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne2P59108 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.18■□□□□ 0.34
Cpne2P59108 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.18■□□□□ 0.34
Cpne2P59108 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cpne2P59108 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cpne2P59108 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.17■□□□□ 0.34
Cpne2P59108 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms