Protein–RNA interactions for Protein: P43688

Nkx2-6, Homeobox protein Nkx-2.6, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-6P43688 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-6P43688 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-6P43688 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-6P43688 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Nkx2-6P43688 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.57■□□□□ 0.72
Nkx2-6P43688 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC19.57■□□□□ 0.72
Nkx2-6P43688 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.56■□□□□ 0.72
Nkx2-6P43688 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Nkx2-6P43688 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.55■□□□□ 0.72
Nkx2-6P43688 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Nkx2-6P43688 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-6P43688 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-6P43688 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Nkx2-6P43688 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Nkx2-6P43688 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.55■□□□□ 0.72
Nkx2-6P43688 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Nkx2-6P43688 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-6P43688 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-6P43688 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
Nkx2-6P43688 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.54■□□□□ 0.72
Nkx2-6P43688 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Nkx2-6P43688 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-6P43688 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.53■□□□□ 0.72
Nkx2-6P43688 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.53■□□□□ 0.72
Nkx2-6P43688 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-6P43688 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Nkx2-6P43688 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nkx2-6P43688 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-6P43688 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
Nkx2-6P43688 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nkx2-6P43688 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Nkx2-6P43688 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Nkx2-6P43688 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nkx2-6P43688 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Gm7143-201ENSMUST00000222811 859 ntBASIC19.51■□□□□ 0.71
Nkx2-6P43688 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nkx2-6P43688 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.5■□□□□ 0.71
Nkx2-6P43688 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Nkx2-6P43688 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nkx2-6P43688 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nkx2-6P43688 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.47■□□□□ 0.71
Nkx2-6P43688 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Nkx2-6P43688 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 11.6 ms