Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Gm15043-201ENSMUST00000118843 1543 ntBASIC16.95■□□□□ 0.3
Hist1h1aP43275 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Hist1h1aP43275 Kdm3b-204ENSMUST00000224715 2032 ntBASIC16.94■□□□□ 0.3
Hist1h1aP43275 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Hist1h1aP43275 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC16.94■□□□□ 0.3
Hist1h1aP43275 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC16.94■□□□□ 0.3
Hist1h1aP43275 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Gm43403-201ENSMUST00000198011 1786 ntBASIC16.93■□□□□ 0.3
Hist1h1aP43275 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Nsd1-206ENSMUST00000224918 1001 ntBASIC16.93■□□□□ 0.3
Hist1h1aP43275 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Hist1h1aP43275 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.93■□□□□ 0.3
Hist1h1aP43275 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Hist1h1aP43275 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC16.91■□□□□ 0.3
Hist1h1aP43275 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Hist1h1aP43275 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.9■□□□□ 0.3
Hist1h1aP43275 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Hist1h1aP43275 Gm34220-201ENSMUST00000223001 2709 ntBASIC16.89■□□□□ 0.29
Hist1h1aP43275 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.89■□□□□ 0.29
Hist1h1aP43275 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Hist1h1aP43275 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist1h1aP43275 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist1h1aP43275 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC16.88■□□□□ 0.29
Hist1h1aP43275 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC16.88■□□□□ 0.29
Hist1h1aP43275 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Hist1h1aP43275 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Hist1h1aP43275 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.87■□□□□ 0.29
Hist1h1aP43275 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Hist1h1aP43275 AC164883.3-201ENSMUST00000227396 1774 ntBASIC16.87■□□□□ 0.29
Hist1h1aP43275 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Hist1h1aP43275 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist1h1aP43275 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.85■□□□□ 0.29
Hist1h1aP43275 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Hist1h1aP43275 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC16.84■□□□□ 0.29
Hist1h1aP43275 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Hist1h1aP43275 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms