Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC16.81■□□□□ 0.28
Rab5cP35278 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab5cP35278 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Rab5cP35278 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab5cP35278 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.81■□□□□ 0.28
Rab5cP35278 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab5cP35278 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Rab5cP35278 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.8■□□□□ 0.28
Rab5cP35278 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Rab5cP35278 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.8■□□□□ 0.28
Rab5cP35278 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Rab5cP35278 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Rab5cP35278 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rab5cP35278 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 Gm5987-201ENSMUST00000196433 1151 ntBASIC16.79■□□□□ 0.28
Rab5cP35278 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC16.79■□□□□ 0.28
Rab5cP35278 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rab5cP35278 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC16.79■□□□□ 0.28
Rab5cP35278 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.78■□□□□ 0.28
Rab5cP35278 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 AC153911.1-201ENSMUST00000220378 758 ntBASIC16.78■□□□□ 0.28
Rab5cP35278 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rab5cP35278 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rab5cP35278 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Rab5cP35278 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Rab5cP35278 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC16.77■□□□□ 0.28
Rab5cP35278 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab5cP35278 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.77■□□□□ 0.28
Rab5cP35278 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rab5cP35278 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Rab5cP35278 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab5cP35278 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab5cP35278 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rab5cP35278 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Rab5cP35278 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC16.77■□□□□ 0.27
Rab5cP35278 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rab5cP35278 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rab5cP35278 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rab5cP35278 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Rab5cP35278 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Rab5cP35278 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
Rab5cP35278 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Rab5cP35278 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rab5cP35278 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab5cP35278 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC16.74■□□□□ 0.27
Rab5cP35278 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Rab5cP35278 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Rab5cP35278 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Rab5cP35278 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.73■□□□□ 0.27
Rab5cP35278 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC16.73■□□□□ 0.27
Rab5cP35278 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Rab5cP35278 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Rab5cP35278 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.72■□□□□ 0.27
Rab5cP35278 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Rab5cP35278 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms