Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sftpa1P35242 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Sftpa1P35242 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC19.23■□□□□ 0.67
Sftpa1P35242 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sftpa1P35242 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Sftpa1P35242 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sftpa1P35242 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sftpa1P35242 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Sftpa1P35242 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.22■□□□□ 0.67
Sftpa1P35242 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Sftpa1P35242 Gm27405-201ENSMUST00000184201 112 ntBASIC19.22■□□□□ 0.67
Sftpa1P35242 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.22■□□□□ 0.67
Sftpa1P35242 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Sftpa1P35242 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.22■□□□□ 0.67
Sftpa1P35242 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Sftpa1P35242 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Gm26833-201ENSMUST00000180899 440 ntBASIC19.21■□□□□ 0.67
Sftpa1P35242 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Gm7143-201ENSMUST00000222811 859 ntBASIC19.21■□□□□ 0.67
Sftpa1P35242 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Sftpa1P35242 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Sftpa1P35242 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sftpa1P35242 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC19.2■□□□□ 0.66
Sftpa1P35242 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.2■□□□□ 0.66
Sftpa1P35242 Gm10493-201ENSMUST00000097270 612 ntBASIC19.2■□□□□ 0.66
Sftpa1P35242 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Sftpa1P35242 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Sftpa1P35242 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Sftpa1P35242 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sftpa1P35242 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.19■□□□□ 0.66
Sftpa1P35242 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Sftpa1P35242 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sftpa1P35242 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Sftpa1P35242 Gm43060-201ENSMUST00000200621 289 ntBASIC19.18■□□□□ 0.66
Sftpa1P35242 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sftpa1P35242 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sftpa1P35242 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sftpa1P35242 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.17■□□□□ 0.66
Sftpa1P35242 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Sftpa1P35242 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sftpa1P35242 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sftpa1P35242 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sftpa1P35242 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sftpa1P35242 Gm42642-201ENSMUST00000200683 355 ntBASIC19.16■□□□□ 0.66
Sftpa1P35242 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.16■□□□□ 0.66
Sftpa1P35242 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Sftpa1P35242 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sftpa1P35242 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sftpa1P35242 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sftpa1P35242 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sftpa1P35242 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Sftpa1P35242 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sftpa1P35242 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sftpa1P35242 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sftpa1P35242 Gm40848-201ENSMUST00000221998 324 ntBASIC19.15■□□□□ 0.66
Sftpa1P35242 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.15■□□□□ 0.66
Sftpa1P35242 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
Sftpa1P35242 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sftpa1P35242 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sftpa1P35242 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sftpa1P35242 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sftpa1P35242 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.14■□□□□ 0.65
Sftpa1P35242 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sftpa1P35242 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.14■□□□□ 0.65
Sftpa1P35242 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sftpa1P35242 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.14■□□□□ 0.65
Sftpa1P35242 Gm37179-201ENSMUST00000194862 823 ntBASIC19.14■□□□□ 0.65
Sftpa1P35242 AC099934.2-201ENSMUST00000196389 70 ntBASIC19.14■□□□□ 0.65
Sftpa1P35242 AC156953.1-201ENSMUST00000196953 70 ntBASIC19.14■□□□□ 0.65
Sftpa1P35242 AC157822.2-201ENSMUST00000200291 70 ntBASIC19.14■□□□□ 0.65
Sftpa1P35242 Spcs1-204ENSMUST00000226782 949 ntBASIC19.14■□□□□ 0.65
Sftpa1P35242 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sftpa1P35242 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Sftpa1P35242 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
Sftpa1P35242 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Sftpa1P35242 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sftpa1P35242 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sftpa1P35242 Gm10849-201ENSMUST00000100397 618 ntBASIC19.13■□□□□ 0.65
Sftpa1P35242 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sftpa1P35242 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sftpa1P35242 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sftpa1P35242 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms