Protein–RNA interactions for Protein: P33434

Mmp2, 72 kDa type IV collagenase, mousemouse

Predictions only

Length 662 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp2P33434 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp2P33434 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp2P33434 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp2P33434 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Mmp2P33434 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.23■□□□□ 0.67
Mmp2P33434 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Mmp2P33434 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.22■□□□□ 0.67
Mmp2P33434 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.22■□□□□ 0.67
Mmp2P33434 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Mmp2P33434 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp2P33434 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp2P33434 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Mmp2P33434 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Mmp2P33434 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Mmp2P33434 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
Mmp2P33434 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC19.2■□□□□ 0.66
Mmp2P33434 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Mmp2P33434 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
Mmp2P33434 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Mmp2P33434 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.19■□□□□ 0.66
Mmp2P33434 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Mmp2P33434 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Mmp2P33434 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.18■□□□□ 0.66
Mmp2P33434 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp2P33434 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp2P33434 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Mmp2P33434 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.17■□□□□ 0.66
Mmp2P33434 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Mmp2P33434 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.17■□□□□ 0.66
Mmp2P33434 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.17■□□□□ 0.66
Mmp2P33434 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Mmp2P33434 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.16■□□□□ 0.66
Mmp2P33434 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Mmp2P33434 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp2P33434 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp2P33434 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.15■□□□□ 0.66
Mmp2P33434 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.15■□□□□ 0.66
Mmp2P33434 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Mmp2P33434 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Mmp2P33434 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Mmp2P33434 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Mmp2P33434 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.15■□□□□ 0.66
Mmp2P33434 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Mmp2P33434 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp2P33434 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp2P33434 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp2P33434 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Mmp2P33434 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.14■□□□□ 0.65
Mmp2P33434 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Mmp2P33434 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.13■□□□□ 0.65
Mmp2P33434 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.13■□□□□ 0.65
Mmp2P33434 Gm22238-201ENSMUST00000175222 88 ntBASIC19.13■□□□□ 0.65
Mmp2P33434 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Mmp2P33434 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 1255.8 ms