Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.68■□□□□ 0.42
Slc6a1P31648 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
Slc6a1P31648 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Slc6a1P31648 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Slc6a1P31648 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Gm16437-201ENSMUST00000025669 507 ntBASIC17.67■□□□□ 0.42
Slc6a1P31648 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Slc6a1P31648 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc6a1P31648 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Slc6a1P31648 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
Slc6a1P31648 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.66■□□□□ 0.42
Slc6a1P31648 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.66■□□□□ 0.42
Slc6a1P31648 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a1P31648 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Slc6a1P31648 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.66■□□□□ 0.42
Slc6a1P31648 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC17.66■□□□□ 0.42
Slc6a1P31648 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.65■□□□□ 0.42
Slc6a1P31648 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Slc6a1P31648 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Slc6a1P31648 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a1P31648 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.64■□□□□ 0.41
Slc6a1P31648 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc6a1P31648 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Slc6a1P31648 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Slc6a1P31648 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.64■□□□□ 0.41
Slc6a1P31648 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a1P31648 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a1P31648 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Slc6a1P31648 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Slc6a1P31648 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Slc6a1P31648 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.62■□□□□ 0.41
Slc6a1P31648 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.62■□□□□ 0.41
Slc6a1P31648 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Slc6a1P31648 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.61■□□□□ 0.41
Slc6a1P31648 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Slc6a1P31648 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Slc6a1P31648 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Slc6a1P31648 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a1P31648 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC17.6■□□□□ 0.41
Slc6a1P31648 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a1P31648 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Slc6a1P31648 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Slc6a1P31648 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms