Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.07■□□□□ 0.64
Clk1P22518 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clk1P22518 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Clk1P22518 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clk1P22518 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.05■□□□□ 0.64
Clk1P22518 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk1P22518 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clk1P22518 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.05■□□□□ 0.64
Clk1P22518 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.05■□□□□ 0.64
Clk1P22518 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Clk1P22518 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk1P22518 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk1P22518 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk1P22518 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.05■□□□□ 0.64
Clk1P22518 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clk1P22518 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.04■□□□□ 0.64
Clk1P22518 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Clk1P22518 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk1P22518 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk1P22518 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.04■□□□□ 0.64
Clk1P22518 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.04■□□□□ 0.64
Clk1P22518 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk1P22518 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Clk1P22518 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Clk1P22518 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clk1P22518 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clk1P22518 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.03■□□□□ 0.64
Clk1P22518 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Clk1P22518 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk1P22518 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Clk1P22518 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Clk1P22518 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.03■□□□□ 0.64
Clk1P22518 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Clk1P22518 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.03■□□□□ 0.64
Clk1P22518 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk1P22518 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Clk1P22518 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
Clk1P22518 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Clk1P22518 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Clk1P22518 Gm5812-201ENSMUST00000061073 957 ntBASIC19.02■□□□□ 0.64
Clk1P22518 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.02■□□□□ 0.64
Clk1P22518 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk1P22518 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clk1P22518 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Clk1P22518 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.01■□□□□ 0.63
Clk1P22518 Gm10399-202ENSMUST00000202768 748 ntBASIC19.01■□□□□ 0.63
Clk1P22518 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Clk1P22518 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk1P22518 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk1P22518 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk1P22518 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Clk1P22518 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
Clk1P22518 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Clk1P22518 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Clk1P22518 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk1P22518 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Clk1P22518 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19■□□□□ 0.63
Clk1P22518 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19■□□□□ 0.63
Clk1P22518 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Clk1P22518 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Clk1P22518 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Clk1P22518 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk1P22518 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk1P22518 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Clk1P22518 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Clk1P22518 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Clk1P22518 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk1P22518 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.98■□□□□ 0.63
Clk1P22518 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk1P22518 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk1P22518 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.98■□□□□ 0.63
Clk1P22518 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk1P22518 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Clk1P22518 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.98■□□□□ 0.63
Clk1P22518 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Clk1P22518 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Clk1P22518 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Clk1P22518 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk1P22518 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Clk1P22518 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.96■□□□□ 0.63
Clk1P22518 Gm43006-201ENSMUST00000197702 1602 ntBASIC18.96■□□□□ 0.63
Clk1P22518 AC154231.1-201ENSMUST00000220564 2175 ntBASIC18.95■□□□□ 0.62
Clk1P22518 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clk1P22518 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.95■□□□□ 0.62
Clk1P22518 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Clk1P22518 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk1P22518 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk1P22518 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Clk1P22518 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms