Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cntn1P12960 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.84■□□□□ 0.77
Cntn1P12960 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.84■□□□□ 0.77
Cntn1P12960 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Cntn1P12960 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.84■□□□□ 0.77
Cntn1P12960 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.84■□□□□ 0.77
Cntn1P12960 Gm21956-201ENSMUST00000179946 522 ntBASIC19.84■□□□□ 0.77
Cntn1P12960 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.84■□□□□ 0.77
Cntn1P12960 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cntn1P12960 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cntn1P12960 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cntn1P12960 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.83■□□□□ 0.77
Cntn1P12960 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.83■□□□□ 0.77
Cntn1P12960 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cntn1P12960 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cntn1P12960 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
Cntn1P12960 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cntn1P12960 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cntn1P12960 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cntn1P12960 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Cntn1P12960 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.82■□□□□ 0.76
Cntn1P12960 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cntn1P12960 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cntn1P12960 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cntn1P12960 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
Cntn1P12960 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Cntn1P12960 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.81■□□□□ 0.76
Cntn1P12960 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.81■□□□□ 0.76
Cntn1P12960 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cntn1P12960 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cntn1P12960 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cntn1P12960 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cntn1P12960 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cntn1P12960 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntn1P12960 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Cntn1P12960 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.8■□□□□ 0.76
Cntn1P12960 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.8■□□□□ 0.76
Cntn1P12960 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cntn1P12960 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntn1P12960 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cntn1P12960 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.79■□□□□ 0.76
Cntn1P12960 Golgb1-201ENSMUST00000023534 498 ntBASIC19.79■□□□□ 0.76
Cntn1P12960 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntn1P12960 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cntn1P12960 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.79■□□□□ 0.76
Cntn1P12960 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cntn1P12960 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntn1P12960 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntn1P12960 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cntn1P12960 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.78■□□□□ 0.76
Cntn1P12960 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntn1P12960 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cntn1P12960 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cntn1P12960 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntn1P12960 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.77■□□□□ 0.76
Cntn1P12960 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntn1P12960 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cntn1P12960 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cntn1P12960 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Cntn1P12960 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cntn1P12960 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.76■□□□□ 0.75
Cntn1P12960 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.76■□□□□ 0.75
Cntn1P12960 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.76■□□□□ 0.75
Cntn1P12960 Gm9870-201ENSMUST00000063874 645 ntBASIC19.76■□□□□ 0.75
Cntn1P12960 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cntn1P12960 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntn1P12960 Gm15039-201ENSMUST00000118914 875 ntBASIC19.75■□□□□ 0.75
Cntn1P12960 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.75■□□□□ 0.75
Cntn1P12960 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntn1P12960 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cntn1P12960 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.75■□□□□ 0.75
Cntn1P12960 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cntn1P12960 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.74■□□□□ 0.75
Cntn1P12960 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntn1P12960 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cntn1P12960 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.73■□□□□ 0.75
Cntn1P12960 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cntn1P12960 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cntn1P12960 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cntn1P12960 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.72■□□□□ 0.75
Cntn1P12960 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Cntn1P12960 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Cntn1P12960 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms