Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Smim1P0C8K7 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smim1P0C8K7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smim1P0C8K7 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smim1P0C8K7 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Smim1P0C8K7 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim1P0C8K7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim1P0C8K7 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim1P0C8K7 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim1P0C8K7 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Smim1P0C8K7 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC14.26□□□□□ -0.13
Smim1P0C8K7 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Smim1P0C8K7 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Smim1P0C8K7 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Gm5913-201ENSMUST00000119397 1399 ntBASIC14.24□□□□□ -0.13
Smim1P0C8K7 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Smim1P0C8K7 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Gm5987-201ENSMUST00000196433 1151 ntBASIC14.23□□□□□ -0.13
Smim1P0C8K7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Smim1P0C8K7 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Smim1P0C8K7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smim1P0C8K7 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smim1P0C8K7 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Gm37035-201ENSMUST00000194809 2148 ntBASIC14.2□□□□□ -0.14
Smim1P0C8K7 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Smim1P0C8K7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim1P0C8K7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim1P0C8K7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smim1P0C8K7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim1P0C8K7 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smim1P0C8K7 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smim1P0C8K7 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Smim1P0C8K7 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms