Protein–RNA interactions for Protein: P04213

T-cell receptor beta chain V region C5 (Fragment), mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04213 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.89■□□□□ 0.77
P04213 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.89■□□□□ 0.77
P04213 Gm43566-201ENSMUST00000196851 808 ntBASIC19.89■□□□□ 0.77
P04213 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
P04213 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
P04213 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04213 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04213 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
P04213 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
P04213 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
P04213 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
P04213 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.86■□□□□ 0.77
P04213 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
P04213 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
P04213 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
P04213 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04213 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P04213 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.85■□□□□ 0.77
P04213 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
P04213 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P04213 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
P04213 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
P04213 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
P04213 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.84■□□□□ 0.77
P04213 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.84■□□□□ 0.77
P04213 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
P04213 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
P04213 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
P04213 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.83■□□□□ 0.77
P04213 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04213 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04213 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
P04213 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
P04213 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
P04213 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
P04213 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
P04213 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
P04213 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
P04213 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.8■□□□□ 0.76
P04213 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
P04213 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
P04213 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04213 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04213 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.79■□□□□ 0.76
P04213 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04213 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
P04213 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
P04213 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.79■□□□□ 0.76
P04213 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.79■□□□□ 0.76
P04213 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
P04213 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
P04213 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
P04213 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04213 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
P04213 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms