Protein–RNA interactions for Protein: P01808

Ig heavy chain V region T601, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01808 Gm7417-201ENSMUST00000192950 473 ntBASIC18.78■□□□□ 0.6
P01808 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
P01808 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.78■□□□□ 0.6
P01808 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
P01808 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
P01808 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
P01808 Gm14117-201ENSMUST00000122417 843 ntBASIC18.77■□□□□ 0.6
P01808 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.77■□□□□ 0.6
P01808 Gm45102-201ENSMUST00000207427 857 ntBASIC18.77■□□□□ 0.6
P01808 Rps24-207ENSMUST00000224568 714 ntBASIC18.77■□□□□ 0.6
P01808 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01808 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01808 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
P01808 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P01808 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
P01808 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
P01808 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
P01808 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
P01808 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
P01808 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
P01808 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.75■□□□□ 0.59
P01808 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01808 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01808 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.75■□□□□ 0.59
P01808 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.75■□□□□ 0.59
P01808 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
P01808 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
P01808 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01808 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
P01808 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01808 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
P01808 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01808 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
P01808 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.73■□□□□ 0.59
P01808 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.73■□□□□ 0.59
P01808 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.73■□□□□ 0.59
P01808 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
P01808 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01808 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01808 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
P01808 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
P01808 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.71■□□□□ 0.59
P01808 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
P01808 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.71■□□□□ 0.59
P01808 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01808 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01808 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01808 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01808 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
P01808 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
P01808 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01808 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
P01808 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
P01808 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01808 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
P01808 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
P01808 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
P01808 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01808 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.68■□□□□ 0.58
P01808 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01808 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.68■□□□□ 0.58
P01808 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.68■□□□□ 0.58
P01808 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
P01808 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01808 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
P01808 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
P01808 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
P01808 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.67■□□□□ 0.58
P01808 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.67■□□□□ 0.58
P01808 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
P01808 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms