Protein–RNA interactions for Protein: P01735

T-cell receptor beta chain V region 86T1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01735 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01735 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
P01735 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.01■□□□□ 0.63
P01735 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
P01735 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
P01735 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
P01735 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01735 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
P01735 Snhg20-203ENSMUST00000182811 2153 ntBASIC19■□□□□ 0.63
P01735 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19■□□□□ 0.63
P01735 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19■□□□□ 0.63
P01735 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
P01735 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
P01735 Gm10620-201ENSMUST00000098379 1332 ntBASIC19■□□□□ 0.63
P01735 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.99■□□□□ 0.63
P01735 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
P01735 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
P01735 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01735 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01735 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
P01735 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
P01735 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.97■□□□□ 0.63
P01735 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
P01735 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
P01735 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01735 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
P01735 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01735 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
P01735 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
P01735 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
P01735 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
P01735 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
P01735 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.94■□□□□ 0.62
P01735 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.94■□□□□ 0.62
P01735 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
P01735 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.94■□□□□ 0.62
P01735 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
P01735 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01735 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
P01735 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
P01735 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01735 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01735 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01735 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
P01735 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
P01735 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
P01735 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
P01735 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01735 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
P01735 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
P01735 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.91■□□□□ 0.62
P01735 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
P01735 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
P01735 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.9■□□□□ 0.62
P01735 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
P01735 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01735 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.9■□□□□ 0.62
P01735 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01735 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
P01735 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.9■□□□□ 0.62
P01735 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
P01735 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
P01735 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
P01735 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms