Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.19■□□□□ 0.5
CcnkO88874 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CcnkO88874 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CcnkO88874 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC18.18■□□□□ 0.5
CcnkO88874 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CcnkO88874 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CcnkO88874 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CcnkO88874 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.18■□□□□ 0.5
CcnkO88874 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CcnkO88874 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CcnkO88874 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.17■□□□□ 0.5
CcnkO88874 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
CcnkO88874 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.16■□□□□ 0.5
CcnkO88874 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CcnkO88874 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
CcnkO88874 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC18.16■□□□□ 0.5
CcnkO88874 Gm43592-201ENSMUST00000196922 1165 ntBASIC18.16■□□□□ 0.5
CcnkO88874 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CcnkO88874 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CcnkO88874 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.15■□□□□ 0.5
CcnkO88874 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.15■□□□□ 0.5
CcnkO88874 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC18.15■□□□□ 0.5
CcnkO88874 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CcnkO88874 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CcnkO88874 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.15■□□□□ 0.5
CcnkO88874 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CcnkO88874 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.15■□□□□ 0.5
CcnkO88874 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Cap2-205ENSMUST00000225824 1634 ntBASIC18.14■□□□□ 0.49
CcnkO88874 Gm10420-201ENSMUST00000121713 882 ntBASIC18.14■□□□□ 0.49
CcnkO88874 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC18.14■□□□□ 0.49
CcnkO88874 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.14■□□□□ 0.49
CcnkO88874 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CcnkO88874 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
CcnkO88874 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CcnkO88874 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC18.13■□□□□ 0.49
CcnkO88874 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CcnkO88874 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC18.13■□□□□ 0.49
CcnkO88874 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.13■□□□□ 0.49
CcnkO88874 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CcnkO88874 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC18.13■□□□□ 0.49
CcnkO88874 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CcnkO88874 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.12■□□□□ 0.49
CcnkO88874 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CcnkO88874 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC18.12■□□□□ 0.49
CcnkO88874 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CcnkO88874 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CcnkO88874 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CcnkO88874 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcnkO88874 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcnkO88874 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CcnkO88874 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
CcnkO88874 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC18.11■□□□□ 0.49
CcnkO88874 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CcnkO88874 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
CcnkO88874 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
CcnkO88874 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CcnkO88874 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.09■□□□□ 0.49
CcnkO88874 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
CcnkO88874 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms