Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Best1O88870 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.01■□□□□ 0.79
Best1O88870 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Best1O88870 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC20■□□□□ 0.79
Best1O88870 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Gm26766-202ENSMUST00000227544 2347 ntBASIC20■□□□□ 0.79
Best1O88870 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Best1O88870 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best1O88870 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best1O88870 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Best1O88870 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best1O88870 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Best1O88870 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Best1O88870 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Best1O88870 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Best1O88870 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Best1O88870 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Best1O88870 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Best1O88870 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Best1O88870 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
Best1O88870 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Best1O88870 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Gm43530-201ENSMUST00000195920 274 ntBASIC19.96■□□□□ 0.79
Best1O88870 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Best1O88870 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.79
Best1O88870 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.95■□□□□ 0.78
Best1O88870 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.95■□□□□ 0.78
Best1O88870 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.95■□□□□ 0.78
Best1O88870 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.95■□□□□ 0.78
Best1O88870 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.95■□□□□ 0.78
Best1O88870 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
Best1O88870 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Best1O88870 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.94■□□□□ 0.78
Best1O88870 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC19.94■□□□□ 0.78
Best1O88870 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Gm27454-201ENSMUST00000185090 204 ntBASIC19.94■□□□□ 0.78
Best1O88870 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.94■□□□□ 0.78
Best1O88870 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.94■□□□□ 0.78
Best1O88870 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Best1O88870 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Best1O88870 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Best1O88870 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.93■□□□□ 0.78
Best1O88870 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Best1O88870 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Best1O88870 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.91■□□□□ 0.78
Best1O88870 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC19.91■□□□□ 0.78
Best1O88870 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
Best1O88870 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Best1O88870 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms