Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC20.03■□□□□ 0.8
ClppO88696 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.03■□□□□ 0.8
ClppO88696 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClppO88696 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClppO88696 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ClppO88696 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.02■□□□□ 0.8
ClppO88696 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ClppO88696 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
ClppO88696 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ClppO88696 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ClppO88696 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ClppO88696 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.01■□□□□ 0.79
ClppO88696 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ClppO88696 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
ClppO88696 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ClppO88696 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20■□□□□ 0.79
ClppO88696 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
ClppO88696 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
ClppO88696 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20■□□□□ 0.79
ClppO88696 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20■□□□□ 0.79
ClppO88696 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
ClppO88696 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.99■□□□□ 0.79
ClppO88696 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.99■□□□□ 0.79
ClppO88696 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
ClppO88696 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
ClppO88696 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
ClppO88696 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.99■□□□□ 0.79
ClppO88696 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC19.99■□□□□ 0.79
ClppO88696 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC19.98■□□□□ 0.79
ClppO88696 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ClppO88696 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
ClppO88696 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClppO88696 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
ClppO88696 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
ClppO88696 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
ClppO88696 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.97■□□□□ 0.79
ClppO88696 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.97■□□□□ 0.79
ClppO88696 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
ClppO88696 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
ClppO88696 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
ClppO88696 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
ClppO88696 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClppO88696 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
ClppO88696 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClppO88696 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
ClppO88696 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
ClppO88696 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.79
ClppO88696 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClppO88696 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ClppO88696 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.95■□□□□ 0.78
ClppO88696 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClppO88696 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ClppO88696 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ClppO88696 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.95■□□□□ 0.78
ClppO88696 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClppO88696 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ClppO88696 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
ClppO88696 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
ClppO88696 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.94■□□□□ 0.78
ClppO88696 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ClppO88696 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
ClppO88696 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ClppO88696 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.93■□□□□ 0.78
ClppO88696 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.93■□□□□ 0.78
ClppO88696 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Gm21956-201ENSMUST00000179946 522 ntBASIC19.93■□□□□ 0.78
ClppO88696 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.93■□□□□ 0.78
ClppO88696 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ClppO88696 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ClppO88696 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ClppO88696 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms