Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tgfbr3O88393 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Tgfbr3O88393 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tgfbr3O88393 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tgfbr3O88393 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
Tgfbr3O88393 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Gm12251-201ENSMUST00000117893 792 ntBASIC19.76■□□□□ 0.75
Tgfbr3O88393 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tgfbr3O88393 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Tgfbr3O88393 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tgfbr3O88393 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Gm5874-201ENSMUST00000096101 508 ntBASIC19.74■□□□□ 0.75
Tgfbr3O88393 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Tgfbr3O88393 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC19.74■□□□□ 0.75
Tgfbr3O88393 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tgfbr3O88393 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tgfbr3O88393 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Tgfbr3O88393 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tgfbr3O88393 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tgfbr3O88393 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.71■□□□□ 0.75
Tgfbr3O88393 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tgfbr3O88393 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.71■□□□□ 0.75
Tgfbr3O88393 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tgfbr3O88393 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.7■□□□□ 0.74
Tgfbr3O88393 AC164629.5-201ENSMUST00000220387 632 ntBASIC19.7■□□□□ 0.74
Tgfbr3O88393 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tgfbr3O88393 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tgfbr3O88393 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Tgfbr3O88393 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tgfbr3O88393 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tgfbr3O88393 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tgfbr3O88393 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Tgfbr3O88393 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
Tgfbr3O88393 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Tgfbr3O88393 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC19.68■□□□□ 0.74
Tgfbr3O88393 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Tgfbr3O88393 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 Gm29257-201ENSMUST00000186115 639 ntBASIC19.67■□□□□ 0.74
Tgfbr3O88393 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Tgfbr3O88393 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.67■□□□□ 0.74
Tgfbr3O88393 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC19.66■□□□□ 0.74
Tgfbr3O88393 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Tgfbr3O88393 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms