Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col5a1O88207 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Col5a1O88207 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.04■□□□□ 0.64
Col5a1O88207 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col5a1O88207 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col5a1O88207 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC19.03■□□□□ 0.64
Col5a1O88207 Gm42569-201ENSMUST00000200539 472 ntBASIC19.03■□□□□ 0.64
Col5a1O88207 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col5a1O88207 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.03■□□□□ 0.64
Col5a1O88207 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col5a1O88207 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.02■□□□□ 0.64
Col5a1O88207 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Col5a1O88207 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Col5a1O88207 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col5a1O88207 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Col5a1O88207 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col5a1O88207 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col5a1O88207 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.02■□□□□ 0.63
Col5a1O88207 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col5a1O88207 Gm10849-201ENSMUST00000100397 618 ntBASIC19.02■□□□□ 0.63
Col5a1O88207 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col5a1O88207 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.02■□□□□ 0.63
Col5a1O88207 Gm43173-201ENSMUST00000202246 593 ntBASIC19.01■□□□□ 0.63
Col5a1O88207 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col5a1O88207 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col5a1O88207 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.01■□□□□ 0.63
Col5a1O88207 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Col5a1O88207 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a1O88207 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col5a1O88207 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col5a1O88207 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19■□□□□ 0.63
Col5a1O88207 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Col5a1O88207 Gm12251-201ENSMUST00000117893 792 ntBASIC19■□□□□ 0.63
Col5a1O88207 Gm10657-201ENSMUST00000193528 1031 ntBASIC19■□□□□ 0.63
Col5a1O88207 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19■□□□□ 0.63
Col5a1O88207 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.99■□□□□ 0.63
Col5a1O88207 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Col5a1O88207 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col5a1O88207 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Col5a1O88207 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a1O88207 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Col5a1O88207 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
Col5a1O88207 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.97■□□□□ 0.63
Col5a1O88207 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC18.97■□□□□ 0.63
Col5a1O88207 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Col5a1O88207 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Col5a1O88207 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Col5a1O88207 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
Col5a1O88207 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Col5a1O88207 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
Col5a1O88207 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Col5a1O88207 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Gm8493-201ENSMUST00000196881 489 ntBASIC18.95■□□□□ 0.62
Col5a1O88207 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.95■□□□□ 0.62
Col5a1O88207 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Col5a1O88207 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.95■□□□□ 0.62
Col5a1O88207 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Col5a1O88207 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.94■□□□□ 0.62
Col5a1O88207 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.94■□□□□ 0.62
Col5a1O88207 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Col5a1O88207 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.94■□□□□ 0.62
Col5a1O88207 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Col5a1O88207 Gm12669-201ENSMUST00000122162 1009 ntBASIC18.93■□□□□ 0.62
Col5a1O88207 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Col5a1O88207 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Col5a1O88207 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms