Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pdlim3O70209 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.71■□□□□ 0.58
Pdlim3O70209 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Pdlim3O70209 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Pdlim3O70209 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim3O70209 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pdlim3O70209 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pdlim3O70209 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.69■□□□□ 0.58
Pdlim3O70209 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC18.69■□□□□ 0.58
Pdlim3O70209 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pdlim3O70209 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pdlim3O70209 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Pdlim3O70209 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim3O70209 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim3O70209 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim3O70209 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18.68■□□□□ 0.58
Pdlim3O70209 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim3O70209 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pdlim3O70209 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim3O70209 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim3O70209 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim3O70209 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim3O70209 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pdlim3O70209 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.66■□□□□ 0.58
Pdlim3O70209 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pdlim3O70209 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.66■□□□□ 0.58
Pdlim3O70209 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pdlim3O70209 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pdlim3O70209 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.65■□□□□ 0.58
Pdlim3O70209 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.65■□□□□ 0.58
Pdlim3O70209 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pdlim3O70209 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pdlim3O70209 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.65■□□□□ 0.58
Pdlim3O70209 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim3O70209 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim3O70209 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim3O70209 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pdlim3O70209 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pdlim3O70209 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.64■□□□□ 0.57
Pdlim3O70209 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.64■□□□□ 0.57
Pdlim3O70209 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC18.64■□□□□ 0.57
Pdlim3O70209 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pdlim3O70209 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Pdlim3O70209 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Pdlim3O70209 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Pdlim3O70209 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim3O70209 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Pdlim3O70209 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
Pdlim3O70209 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.62■□□□□ 0.57
Pdlim3O70209 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.62■□□□□ 0.57
Pdlim3O70209 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms