Protein–RNA interactions for Protein: O70174

Chrna4, Neuronal acetylcholine receptor subunit alpha-4, mousemouse

Predictions only

Length 629 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna4O70174 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Chrna4O70174 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna4O70174 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Chrna4O70174 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna4O70174 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna4O70174 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna4O70174 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.89■□□□□ 0.93
Chrna4O70174 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.89■□□□□ 0.93
Chrna4O70174 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Chrna4O70174 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.89■□□□□ 0.93
Chrna4O70174 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna4O70174 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
Chrna4O70174 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna4O70174 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Chrna4O70174 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.88■□□□□ 0.93
Chrna4O70174 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chrna4O70174 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Chrna4O70174 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna4O70174 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna4O70174 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna4O70174 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.87■□□□□ 0.93
Chrna4O70174 Gm40881-201ENSMUST00000223397 166 ntBASIC20.87■□□□□ 0.93
Chrna4O70174 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chrna4O70174 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna4O70174 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna4O70174 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna4O70174 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.86■□□□□ 0.93
Chrna4O70174 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chrna4O70174 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Chrna4O70174 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.86■□□□□ 0.93
Chrna4O70174 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chrna4O70174 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chrna4O70174 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.85■□□□□ 0.93
Chrna4O70174 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.85■□□□□ 0.93
Chrna4O70174 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Chrna4O70174 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chrna4O70174 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chrna4O70174 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.84■□□□□ 0.93
Chrna4O70174 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.84■□□□□ 0.93
Chrna4O70174 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chrna4O70174 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Chrna4O70174 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.83■□□□□ 0.93
Chrna4O70174 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.83■□□□□ 0.93
Chrna4O70174 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chrna4O70174 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.83■□□□□ 0.93
Chrna4O70174 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.83■□□□□ 0.92
Chrna4O70174 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna4O70174 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna4O70174 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna4O70174 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Chrna4O70174 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.82■□□□□ 0.92
Chrna4O70174 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna4O70174 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chrna4O70174 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Chrna4O70174 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna4O70174 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.81■□□□□ 0.92
Chrna4O70174 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna4O70174 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Chrna4O70174 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chrna4O70174 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.8■□□□□ 0.92
Chrna4O70174 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.8■□□□□ 0.92
Chrna4O70174 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.8■□□□□ 0.92
Chrna4O70174 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.79■□□□□ 0.92
Chrna4O70174 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna4O70174 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna4O70174 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chrna4O70174 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna4O70174 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Chrna4O70174 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chrna4O70174 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms