Protein–RNA interactions for Protein: O55240

Rdh5, 11-cis retinol dehydrogenase, mousemouse

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh5O55240 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh5O55240 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh5O55240 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh5O55240 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh5O55240 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh5O55240 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.56■□□□□ 0.72
Rdh5O55240 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh5O55240 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh5O55240 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh5O55240 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh5O55240 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.54■□□□□ 0.72
Rdh5O55240 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.54■□□□□ 0.72
Rdh5O55240 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh5O55240 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.54■□□□□ 0.72
Rdh5O55240 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh5O55240 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh5O55240 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rdh5O55240 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.53■□□□□ 0.72
Rdh5O55240 Gm10399-202ENSMUST00000202768 748 ntBASIC19.53■□□□□ 0.72
Rdh5O55240 Gm45102-201ENSMUST00000207427 857 ntBASIC19.53■□□□□ 0.72
Rdh5O55240 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Rdh5O55240 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh5O55240 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh5O55240 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Rdh5O55240 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.52■□□□□ 0.72
Rdh5O55240 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rdh5O55240 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh5O55240 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rdh5O55240 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Rdh5O55240 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh5O55240 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh5O55240 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh5O55240 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rdh5O55240 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.51■□□□□ 0.71
Rdh5O55240 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.51■□□□□ 0.71
Rdh5O55240 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.51■□□□□ 0.71
Rdh5O55240 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rdh5O55240 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Rdh5O55240 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rdh5O55240 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh5O55240 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh5O55240 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh5O55240 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rdh5O55240 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh5O55240 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh5O55240 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh5O55240 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh5O55240 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.48■□□□□ 0.71
Rdh5O55240 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.48■□□□□ 0.71
Rdh5O55240 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.48■□□□□ 0.71
Rdh5O55240 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rdh5O55240 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Rdh5O55240 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh5O55240 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh5O55240 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.47■□□□□ 0.71
Rdh5O55240 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.47■□□□□ 0.71
Rdh5O55240 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rdh5O55240 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rdh5O55240 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh5O55240 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rdh5O55240 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rdh5O55240 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Rdh5O55240 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh5O55240 Gm14117-201ENSMUST00000122417 843 ntBASIC19.46■□□□□ 0.71
Rdh5O55240 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rdh5O55240 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.46■□□□□ 0.71
Rdh5O55240 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rdh5O55240 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.46■□□□□ 0.71
Rdh5O55240 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms