Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ldb2O55203 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.61■□□□□ 0.89
Ldb2O55203 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.61■□□□□ 0.89
Ldb2O55203 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ldb2O55203 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
Ldb2O55203 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.61■□□□□ 0.89
Ldb2O55203 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ldb2O55203 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.6■□□□□ 0.89
Ldb2O55203 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.6■□□□□ 0.89
Ldb2O55203 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.6■□□□□ 0.89
Ldb2O55203 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Ldb2O55203 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ldb2O55203 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb2O55203 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb2O55203 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ldb2O55203 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb2O55203 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb2O55203 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ldb2O55203 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.59■□□□□ 0.89
Ldb2O55203 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ldb2O55203 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb2O55203 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb2O55203 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb2O55203 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ldb2O55203 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.58■□□□□ 0.89
Ldb2O55203 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Ldb2O55203 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ldb2O55203 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb2O55203 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb2O55203 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.57■□□□□ 0.88
Ldb2O55203 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ldb2O55203 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.57■□□□□ 0.88
Ldb2O55203 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ldb2O55203 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb2O55203 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb2O55203 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.56■□□□□ 0.88
Ldb2O55203 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.56■□□□□ 0.88
Ldb2O55203 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ldb2O55203 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.56■□□□□ 0.88
Ldb2O55203 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.56■□□□□ 0.88
Ldb2O55203 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb2O55203 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb2O55203 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ldb2O55203 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb2O55203 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Ldb2O55203 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb2O55203 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ldb2O55203 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.54■□□□□ 0.88
Ldb2O55203 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.54■□□□□ 0.88
Ldb2O55203 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.54■□□□□ 0.88
Ldb2O55203 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ldb2O55203 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.53■□□□□ 0.88
Ldb2O55203 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb2O55203 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb2O55203 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.53■□□□□ 0.88
Ldb2O55203 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.53■□□□□ 0.88
Ldb2O55203 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb2O55203 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ldb2O55203 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb2O55203 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb2O55203 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb2O55203 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Ldb2O55203 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ldb2O55203 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ldb2O55203 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.5■□□□□ 0.87
Ldb2O55203 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.5■□□□□ 0.87
Ldb2O55203 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Ldb2O55203 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.5■□□□□ 0.87
Ldb2O55203 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ldb2O55203 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ldb2O55203 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ldb2O55203 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.49■□□□□ 0.87
Ldb2O55203 Gm9959-201ENSMUST00000068277 390 ntBASIC20.49■□□□□ 0.87
Ldb2O55203 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.49■□□□□ 0.87
Ldb2O55203 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms