Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6dO55057 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pde6dO55057 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Pde6dO55057 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.26■□□□□ 0.19
Pde6dO55057 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pde6dO55057 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 AC131739.1-201ENSMUST00000221692 1245 ntBASIC16.25■□□□□ 0.19
Pde6dO55057 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Pde6dO55057 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Pde6dO55057 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Gm12818-201ENSMUST00000117562 1349 ntBASIC16.24■□□□□ 0.19
Pde6dO55057 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.24■□□□□ 0.19
Pde6dO55057 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Pde6dO55057 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Pde6dO55057 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pde6dO55057 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC16.23■□□□□ 0.19
Pde6dO55057 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Pde6dO55057 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Pde6dO55057 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Pde6dO55057 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Pde6dO55057 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Pde6dO55057 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
Pde6dO55057 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.22■□□□□ 0.19
Pde6dO55057 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Pde6dO55057 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6dO55057 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.21■□□□□ 0.19
Pde6dO55057 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Pde6dO55057 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Pde6dO55057 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pde6dO55057 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pde6dO55057 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pde6dO55057 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Pde6dO55057 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.2■□□□□ 0.18
Pde6dO55057 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC16.2■□□□□ 0.18
Pde6dO55057 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Pde6dO55057 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Pde6dO55057 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.19■□□□□ 0.18
Pde6dO55057 Gm43182-201ENSMUST00000199476 2528 ntBASIC16.19■□□□□ 0.18
Pde6dO55057 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC16.19■□□□□ 0.18
Pde6dO55057 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.19■□□□□ 0.18
Pde6dO55057 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Pde6dO55057 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Pde6dO55057 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms