Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Banf1O54962 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Banf1O54962 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21■□□□□ 0.95
Banf1O54962 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Banf1O54962 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Banf1O54962 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Banf1O54962 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Banf1O54962 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC21■□□□□ 0.95
Banf1O54962 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
Banf1O54962 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Banf1O54962 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Banf1O54962 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Banf1O54962 Gm28536-201ENSMUST00000190971 1317 ntBASIC21■□□□□ 0.95
Banf1O54962 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Banf1O54962 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.99■□□□□ 0.95
Banf1O54962 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.99■□□□□ 0.95
Banf1O54962 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Banf1O54962 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Banf1O54962 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Banf1O54962 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Banf1O54962 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Banf1O54962 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.98■□□□□ 0.95
Banf1O54962 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.98■□□□□ 0.95
Banf1O54962 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Banf1O54962 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Banf1O54962 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.97■□□□□ 0.95
Banf1O54962 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.97■□□□□ 0.95
Banf1O54962 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.97■□□□□ 0.95
Banf1O54962 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Banf1O54962 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Banf1O54962 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Banf1O54962 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Banf1O54962 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.96■□□□□ 0.95
Banf1O54962 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Banf1O54962 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Banf1O54962 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.96■□□□□ 0.95
Banf1O54962 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Banf1O54962 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Banf1O54962 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.95
Banf1O54962 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Banf1O54962 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Banf1O54962 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Banf1O54962 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Banf1O54962 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Banf1O54962 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Banf1O54962 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.93■□□□□ 0.94
Banf1O54962 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.93■□□□□ 0.94
Banf1O54962 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.93■□□□□ 0.94
Banf1O54962 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.93■□□□□ 0.94
Banf1O54962 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Banf1O54962 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms